| TMalign.f: |
| |
| This program is to identify the best alignment of two protein |
| structures that gives the highest TM-score. Input structures must |
| be in the PDB format. By default, TM-score is normalized by the |
| second protein. Users can obtain a brief instruction by simply |
| running the program without arguments. For comments/suggestions, |
| please contact email: zhng@umich.edu. |
| |
| Reference to cite: |
| Yang Zhang, Jeffrey Skolnick, Nucl. Acid Res. 2005 33: 2303-9 |
| |
| Permission to use, copy, modify, and distribute this program for |
| any purpose, with or without fee, is hereby granted, provided that |
| the notices on the head, the reference information, and this |
| copyright notice appear in all copies or substantial portions of |
| the Software. It is provided "as is" without express or implied |
| warranty. |
| |
| --- |
| |
| TMscore.f: |
| |
| This program is to compare two protein structures and identify the |
| best superposition that has the highest TM-score. Input structures |
| must be in the PDB format. By default, TM-score is normalized by |
| the second protein. Users can obtain a brief instruction by simply |
| running the program without arguments. For comments/suggestions, |
| please contact email: zhng@umich.edu. |
| |
| Reference: |
| Yang Zhang, Jeffrey Skolnick, Proteins, 2004 57:702-10. |
| |
| Permission to use, copy, modify, and distribute this program for |
| any purpose, with or without fee, is hereby granted, provided that |
| the notices on the head, the reference information, and this |
| copyright notice appear in all copies or substantial portions of |
| the Software. It is provided "as is" without express or implied |
| warranty. |
